WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39G10AR.12a Sequence Name  Y39G10AR.12a
Length (nt)  1524   Chromosome Location  I: 2297817-2297919
Chromosome . Primary Identifier  I Chromosome Location . Start  2297817
Chromosome Location . End  2297919
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.12a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26990 TPXL-1, isoform a 54.2 507 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00081312
WBRNAi00081313
WBRNAi00099828
WBRNAi00085719
WBRNAi00026678
WBRNAi00071765
WBRNAi00112000
WBRNAi00056265
WBRNAi00100866
WBRNAi00071093
WBRNAi00099222
WBRNAi00099626
WBRNAi00099424
WBRNAi00000126
WBRNAi00000127
WBRNAi00026676
WBRNAi00026677
WBRNAi00026679
WBRNAi00100118
WBRNAi00100492
WBRNAi00100305
WBRNAi00100679
WBRNAi00101053

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.12a 2297817 2297919 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021470 tpxl-1 Y39G10AR.12 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.12a 2297817 2297919 -1
CDS:Y39G10AR.12a 2302826 2302974 -1
CDS:Y39G10AR.12a 2303027 2303113 -1
CDS:Y39G10AR.12a 2303160 2304199 -1
CDS:Y39G10AR.12a 2304248 2304392 -1

1 Sequence

Length
1524

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39G10AR.12a.1 Y39G10AR.12a.1 1950   I: 2297392-2304393