WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.10.1 Sequence Name  Y39G10AR.10.1
Length (nt)  2280   Chromosome Location  I: 2300086-2302813
Chromosome . Primary Identifier  I Chromosome Location . Start  2300086
Chromosome Location . End  2302813 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021468 epg-2 Y39G10AR.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.10 Y39G10AR.10 2073   I: 2300113-2300169

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.10.1 2300086 2302813 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4174   84   I: 2300086-2300169 Caenorhabditis elegans
Exon4175   102   I: 2300465-2300566 Caenorhabditis elegans
Exon4176   2094   I: 2300720-2302813 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.10.1 2300086 2302813 1

1 Sequence

Length
2280

1 Sequence Ontology Term

Identifier Name Description
transcript