WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39G10AR.12b Sequence Name  Y39G10AR.12b
Length (nt)  1449   Chromosome Location  I: 2302798-2302974
Chromosome . Primary Identifier  I Chromosome Location . Start  2302798
Chromosome Location . End  2302974
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.12b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29999 TPXL-1, isoform b 52.0 482 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00081312
WBRNAi00085719
WBRNAi00071765
WBRNAi00112000
WBRNAi00056265
WBRNAi00071093
WBRNAi00000126
WBRNAi00026676
WBRNAi00026677

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.12b 2302798 2302974 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021470 tpxl-1 Y39G10AR.12 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.12b 2302798 2302974 -1
CDS:Y39G10AR.12b 2303027 2303113 -1
CDS:Y39G10AR.12b 2303160 2304199 -1
CDS:Y39G10AR.12b 2304248 2304392 -1

1 Sequence

Length
1449

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39G10AR.12b.1 Y39G10AR.12b.1 1516   I: 2302736-2304397