WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.13b.1 Sequence Name  Y39G10AR.13b.1
Length (nt)  1716   Chromosome Location  I: 2304716-2306586
Chromosome . Primary Identifier  I Chromosome Location . Start  2304716
Chromosome Location . End  2306586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.13b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002047 icp-1 Y39G10AR.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.13b Y39G10AR.13b 1716   I: 2304716-2304844

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.13b.1 2304716 2306586 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4186   129   I: 2304716-2304844 Caenorhabditis elegans
Exon4188   681   I: 2304899-2305579 Caenorhabditis elegans
Exon4190   789   I: 2305631-2306419 Caenorhabditis elegans
Exon4191   117   I: 2306470-2306586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.13b.1 2304716 2306586 -1

1 Sequence

Length
1716

1 Sequence Ontology Term

Identifier Name Description
transcript