WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.9a.1 Sequence Name  Y39G10AR.9a.1
Length (nt)  1405   Chromosome Location  I: 2307404-2308975
Chromosome . Primary Identifier  I Chromosome Location . Start  2307404
Chromosome Location . End  2308975 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021467 Y39G10AR.9 Y39G10AR.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.9a Y39G10AR.9a 1206   I: 2307410-2307492

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.9a.1 2307404 2308975 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4196   89   I: 2307404-2307492 Caenorhabditis elegans
Exon4197   355   I: 2307536-2307890 Caenorhabditis elegans
Exon4199   580   I: 2307962-2308541 Caenorhabditis elegans
Exon4202   381   I: 2308595-2308975 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.9a.1 2307404 2308975 1

1 Sequence

Length
1405

1 Sequence Ontology Term

Identifier Name Description
transcript