WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.14a.1 Sequence Name  Y39G10AR.14a.1
Length (nt)  2615   Chromosome Location  I: 2318291-2321817
Chromosome . Primary Identifier  I Chromosome Location . Start  2318291
Chromosome Location . End  2321817 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.14a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003156 mcm-4 Y39G10AR.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.14a Y39G10AR.14a 2472   I: 2318427-2318730

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.14a.1 2318291 2321817 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4234   440   I: 2318291-2318730 Caenorhabditis elegans
Exon4236   214   I: 2319070-2319283 Caenorhabditis elegans
Exon4237   1369   I: 2319333-2320701 Caenorhabditis elegans
Exon4238   229   I: 2321053-2321281 Caenorhabditis elegans
Exon4239   226   I: 2321328-2321553 Caenorhabditis elegans
Exon4240   57   I: 2321624-2321680 Caenorhabditis elegans
Exon4241   80   I: 2321738-2321817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.14a.1 2318291 2321817 -1

1 Sequence

Length
2615

1 Sequence Ontology Term

Identifier Name Description
transcript