WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.16.1 Sequence Name  Y39G10AR.16.1
Length (nt)  803   Chromosome Location  I: 2330895-2332652
Chromosome . Primary Identifier  I Chromosome Location . Start  2330895
Chromosome Location . End  2332652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021472 Y39G10AR.16 Y39G10AR.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.16 Y39G10AR.16 684   I: 2330962-2331288

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.16.1 2330895 2332652 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4257   394   I: 2330895-2331288 Caenorhabditis elegans
Exon4258   126   I: 2331338-2331463 Caenorhabditis elegans
Exon4259   188   I: 2331509-2331696 Caenorhabditis elegans
Exon4260   95   I: 2332558-2332652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.16.1 2330895 2332652 -1

1 Sequence

Length
803

1 Sequence Ontology Term

Identifier Name Description
transcript