WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39G10AR.5 Sequence Name  Y39G10AR.5
Length (nt)  2754   Chromosome Location  I: 2342383-2342407
Chromosome . Primary Identifier  I Chromosome Location . Start  2342383
Chromosome Location . End  2342407
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36737 ZEEL-1 105.7 917 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00056278
WBRNAi00004587

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.5 2342383 2342407 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021463 zeel-1 Y39G10AR.5 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.5 2342383 2342407 1
CDS:Y39G10AR.5 2342520 2342705 1
CDS:Y39G10AR.5 2344100 2344261 1
CDS:Y39G10AR.5 2345098 2345223 1
CDS:Y39G10AR.5 2345268 2345384 1
CDS:Y39G10AR.5 2346368 2346469 1
CDS:Y39G10AR.5 2346549 2346716 1
CDS:Y39G10AR.5 2346764 2346891 1
CDS:Y39G10AR.5 2347478 2347743 1
CDS:Y39G10AR.5 2347791 2347945 1
CDS:Y39G10AR.5 2347992 2348304 1
CDS:Y39G10AR.5 2349049 2349651 1
CDS:Y39G10AR.5 2350066 2350468 1

1 Sequence

Length
2754

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39G10AR.5.1 Y39G10AR.5.1 2989   I: 2342216-2350536