WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y39G10AR.3a Sequence Name  Y39G10AR.3a
Length (nt)  2952   Chromosome Location  I: 2357883-2357994
Chromosome . Primary Identifier  I Chromosome Location . Start  2357883
Chromosome Location . End  2357994
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49798 NEKL-1, isoform a 110.1 983 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056276
WBRNAi00056277
WBRNAi00004597

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.3a 2357883 2357994 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021461 nekl-1 Y39G10AR.3 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y39G10AR.3a 2357883 2357994 1
CDS:Y39G10AR.3a 2358418 2358680 1
CDS:Y39G10AR.3a 2358893 2358948 1
CDS:Y39G10AR.3a 2360069 2360175 1
CDS:Y39G10AR.3a 2360223 2360338 1
CDS:Y39G10AR.3a 2361566 2361789 1
CDS:Y39G10AR.3a 2362713 2362989 1
CDS:Y39G10AR.3a 2363509 2363619 1
CDS:Y39G10AR.3a 2364256 2364402 1
CDS:Y39G10AR.3a 2364454 2364560 1
CDS:Y39G10AR.3a 2364615 2364686 1
CDS:Y39G10AR.3a 2365101 2365214 1
CDS:Y39G10AR.3a 2368920 2369058 1
CDS:Y39G10AR.3a 2369104 2369262 1
CDS:Y39G10AR.3a 2369382 2369472 1
CDS:Y39G10AR.3a 2369521 2369651 1
CDS:Y39G10AR.3a 2369971 2370170 1
CDS:Y39G10AR.3a 2371097 2371195 1
CDS:Y39G10AR.3a 2371247 2371417 1
CDS:Y39G10AR.3a 2372674 2372929 1

1 Sequence

Length
2952

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y39G10AR.3a.1 Y39G10AR.3a.1 3008   I: 2357883-2372985