WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.18c.1 Sequence Name  Y39G10AR.18c.1
Length (nt)  1092   Chromosome Location  I: 2384591-2389951
Chromosome . Primary Identifier  I Chromosome Location . Start  2384591
Chromosome Location . End  2389951 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.18c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021474 dot-1.1 Y39G10AR.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.18c Y39G10AR.18c 1092   I: 2384591-2384991

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.18c.1 2384591 2389951 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4387   401   I: 2384591-2384991 Caenorhabditis elegans
Exon4391   622   I: 2388157-2388778 Caenorhabditis elegans
Exon4392   69   I: 2389883-2389951 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.18c.1 2384591 2389951 -1

1 Sequence

Length
1092

1 Sequence Ontology Term

Identifier Name Description
transcript