WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.2b.1 Sequence Name  Y39G10AR.2b.1
Length (nt)  2036   Chromosome Location  I: 2402230-2409996
Chromosome . Primary Identifier  I Chromosome Location . Start  2402230
Chromosome Location . End  2409996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021460 zwl-1 Y39G10AR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.2b Y39G10AR.2b 1887   I: 2402235-2402324

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.2b.1 2402230 2409996 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4413   95   I: 2402230-2402324 Caenorhabditis elegans
Exon4416   280   I: 2403016-2403295 Caenorhabditis elegans
Exon4418   94   I: 2403345-2403438 Caenorhabditis elegans
Exon4420   325   I: 2404645-2404969 Caenorhabditis elegans
Exon4422   272   I: 2406327-2406598 Caenorhabditis elegans
Exon4427   255   I: 2407822-2408076 Caenorhabditis elegans
Exon4431   715   I: 2409282-2409996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.2b.1 2402230 2409996 1

1 Sequence

Length
2036

1 Sequence Ontology Term

Identifier Name Description
transcript