WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F23C8.4.1 Sequence Name  F23C8.4.1
Length (nt)  1025   Chromosome Location  I: 2434002-2435691
Chromosome . Primary Identifier  I Chromosome Location . Start  2434002
Chromosome Location . End  2435691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F23C8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017733 ubxn-1 F23C8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F23C8.4 F23C8.4 900   I: 2434011-2434222

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F23C8.4.1 2434002 2435691 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4467   221   I: 2434002-2434222 Caenorhabditis elegans
Exon4468   273   I: 2434280-2434552 Caenorhabditis elegans
Exon4469   247   I: 2434605-2434851 Caenorhabditis elegans
Exon4470   124   I: 2434893-2435016 Caenorhabditis elegans
Exon4471   160   I: 2435532-2435691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F23C8.4.1 2434002 2435691 1

1 Sequence

Length
1025

1 Sequence Ontology Term

Identifier Name Description
transcript