WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y74C10AR.3a.1 Sequence Name  Y74C10AR.3a.1
Length (nt)  2482   Chromosome Location  I: 2472060-2485391
Chromosome . Primary Identifier  I Chromosome Location . Start  2472060
Chromosome Location . End  2485391 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y74C10AR.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022281 abtm-1 Y74C10AR.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y74C10AR.3a Y74C10AR.3a 2115   I: 2472418-2472504

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y74C10AR.3a.1 2472060 2485391 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4522   445   I: 2472060-2472504 Caenorhabditis elegans
Exon4525   351   I: 2473311-2473661 Caenorhabditis elegans
Exon4526   629   I: 2475010-2475638 Caenorhabditis elegans
Exon4529   573   I: 2478228-2478800 Caenorhabditis elegans
Exon4530   265   I: 2480304-2480568 Caenorhabditis elegans
Exon4532   72   I: 2482348-2482419 Caenorhabditis elegans
Exon4535   78   I: 2485198-2485275 Caenorhabditis elegans
Exon4538   69   I: 2485323-2485391 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y74C10AR.3a.1 2472060 2485391 -1

1 Sequence

Length
2482

1 Sequence Ontology Term

Identifier Name Description
transcript