WormMine: Gene WBGene00255578

• WormBase Gene ID: WBGene00255578
• Gene Name: mir-8193
• Sequence Name: Y23H5B.14
• Organism: Caenorhabditis elegans
• Automated Description: Enriched in neurons based on RNA-seq studies. Is affected by ogt-1 based on RNA-seq studies.
• Biotype: SO:0001265
• Genetic Position: :±
• Length (nt): 60

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00255578

Genomics

2 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:Y23H5B.14a	Y23H5B.14a	23	I: 2538611-2538633
Transcript:Y23H5B.14b	Y23H5B.14b	22	I: 2538649-2538670

Other

0 CDSs

3 RNAi Result

• WBRNAi00055708
• WBRNAi00036726
• WBRNAi00073342

8 Allele

• gk963902
• gk964159
• gk964303
• WBVar02039291
• WBVar00266860
• WBVar02102553
• WBVar02120912
• WBVar00024446

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00255578
• Start: 2538611
• End: 2538670
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology.	DESEQ2, fold change > 2 and FDR < 0.01.	WBPaper00062103:neuron_enriched
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00255578
• Start: 2538611
• End: 2538670
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 60

1 Sequence Ontology Term