WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C55C2.3.1 Sequence Name  C55C2.3.1
Length (nt)  863   Chromosome Location  I: 2560372-2561830
Chromosome . Primary Identifier  I Chromosome Location . Start  2560372
Chromosome Location . End  2561830 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55C2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016949 C55C2.3 C55C2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C55C2.3 C55C2.3 825   I: 2560400-2560536

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C55C2.3.1 2560372 2561830 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4618   165   I: 2560372-2560536 Caenorhabditis elegans
Exon4619   91   I: 2560888-2560978 Caenorhabditis elegans
Exon4620   171   I: 2561025-2561195 Caenorhabditis elegans
Exon4621   131   I: 2561348-2561478 Caenorhabditis elegans
Exon4622   305   I: 2561526-2561830 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C55C2.3.1 2560372 2561830 1

1 Sequence

Length
863

1 Sequence Ontology Term

Identifier Name Description
transcript