WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C55C2.1 Sequence Name  C55C2.1
Length (nt)  537   Chromosome Location  I: 2568872-2568958
Chromosome . Primary Identifier  I Chromosome Location . Start  2568872
Chromosome Location . End  2568958
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C55C2.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45821 SCRT-1 19.9 178 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00043235
WBRNAi00069486
WBRNAi00069488
WBRNAi00069487
WBRNAi00069490
WBRNAi00069489
WBRNAi00069491
WBRNAi00069494
WBRNAi00069493
WBRNAi00069496
WBRNAi00069495
WBRNAi00069498
WBRNAi00069497
WBRNAi00069484
WBRNAi00069483
WBRNAi00069485
WBRNAi00069492
WBRNAi00070172

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C55C2.1 2568872 2568958 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016948 scrt-1 C55C2.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C55C2.1 2568872 2568958 1
CDS:C55C2.1 2569837 2570025 1
CDS:C55C2.1 2570072 2570144 1
CDS:C55C2.1 2570510 2570596 1
CDS:C55C2.1 2570646 2570746 1

1 Sequence

Length
537

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C55C2.1.1 C55C2.1.1 862   I: 2568860-2571059