WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07A3.1a.1 Sequence Name  K07A3.1a.1
Length (nt)  1216   Chromosome Location  I: 2581015-2586124
Chromosome . Primary Identifier  I Chromosome Location . Start  2581015
Chromosome Location . End  2586124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A3.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001404 fbp-1 K07A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07A3.1a K07A3.1a 1026   I: 2581203-2581286

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07A3.1a.1 2581015 2586124 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4668   272   I: 2581015-2581286 Caenorhabditis elegans
Exon4671   363   I: 2582566-2582928 Caenorhabditis elegans
Exon4672   397   I: 2583981-2584377 Caenorhabditis elegans
Exon4675   184   I: 2585941-2586124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07A3.1a.1 2581015 2586124 -1

1 Sequence

Length
1216

1 Sequence Ontology Term

Identifier Name Description
transcript