WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:K07A3.2b Sequence Name  K07A3.2b
Length (nt)  3311   Chromosome Location  I: 2587696-2595242
Chromosome . Primary Identifier  I Chromosome Location . Start  2587696
Chromosome Location . End  2595242 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07A3.2b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004226 ptr-12 K07A3.2 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07A3.2b 2587696 2595242 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4677   141   I: 2587696-2587836 Caenorhabditis elegans
Exon4679   257   I: 2589011-2589267 Caenorhabditis elegans
Exon4681   188   I: 2589449-2589636 Caenorhabditis elegans
Exon4683   120   I: 2589689-2589808 Caenorhabditis elegans
Exon4685   416   I: 2590535-2590950 Caenorhabditis elegans
Exon4687   749   I: 2591001-2591749 Caenorhabditis elegans
Exon4689   501   I: 2591887-2592387 Caenorhabditis elegans
Exon4691   184   I: 2592432-2592615 Caenorhabditis elegans
Exon4693   275   I: 2593495-2593769 Caenorhabditis elegans
Exon4695   231   I: 2593834-2594064 Caenorhabditis elegans
Exon4697   61   I: 2594282-2594342 Caenorhabditis elegans
Exon4699   145   I: 2594387-2594531 Caenorhabditis elegans
Exon4700   43   I: 2595200-2595242 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07A3.2b 2587696 2595242 -1

1 Sequence

Length
3311

1 Sequence Ontology Term

Identifier Name Description
transcript