WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y23H5A.7b Sequence Name  Y23H5A.7b
Length (nt)  2262   Chromosome Location  I: 2623360-2623428
Chromosome . Primary Identifier  I Chromosome Location . Start  2623360
Chromosome Location . End  2623428
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y23H5A.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54491 CARS-1, isoform b 87.1 753 Caenorhabditis elegans
 

Other

22 RNAi

WormBase ID
WBRNAi00095773
WBRNAi00096301
WBRNAi00094332
WBRNAi00055703
WBRNAi00055704
WBRNAi00066874
WBRNAi00066875
WBRNAi00004566
WBRNAi00085416
WBRNAi00085742
WBRNAi00094074
WBRNAi00097777
WBRNAi00026627
WBRNAi00026628
WBRNAi00116639
WBRNAi00096901
WBRNAi00094448
WBRNAi00096321
WBRNAi00096404
WBRNAi00096487
WBRNAi00096570
WBRNAi00096962

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y23H5A.7b 2623360 2623428 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000800 cars-1 Y23H5A.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y23H5A.7b 2623360 2623428 -1
CDS:Y23H5A.7b 2623644 2623955 -1
CDS:Y23H5A.7b 2624015 2624543 -1
CDS:Y23H5A.7b 2625327 2626025 -1
CDS:Y23H5A.7b 2626521 2627029 -1
CDS:Y23H5A.7b 2627075 2627196 -1
CDS:Y23H5A.7b 2628091 2628112 -1

1 Sequence

Length
2262

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y23H5A.7b.1 Y23H5A.7b.1 2523   I: 2623099-2628112