WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y23H5A.7c.1 Sequence Name  Y23H5A.7c.1
Length (nt)  2265   Chromosome Location  I: 2623360-2628112
Chromosome . Primary Identifier  I Chromosome Location . Start  2623360
Chromosome Location . End  2628112 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y23H5A.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000800 cars-1 Y23H5A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y23H5A.7c Y23H5A.7c 2265   I: 2623360-2623428

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y23H5A.7c.1 2623360 2628112 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4826   69   I: 2623360-2623428 Caenorhabditis elegans
Exon4828   312   I: 2623644-2623955 Caenorhabditis elegans
Exon4830   529   I: 2624015-2624543 Caenorhabditis elegans
Exon4832   699   I: 2625327-2626025 Caenorhabditis elegans
Exon4834   509   I: 2626521-2627029 Caenorhabditis elegans
Exon4836   125   I: 2627075-2627199 Caenorhabditis elegans
Exon4838   22   I: 2628091-2628112 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y23H5A.7c.1 2623360 2628112 -1

1 Sequence

Length
2265

1 Sequence Ontology Term

Identifier Name Description
transcript