WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40E3.5.2 Sequence Name  F40E3.5.2
Length (nt)  1159   Chromosome Location  I: 2645266-2657233
Chromosome . Primary Identifier  I Chromosome Location . Start  2645266
Chromosome Location . End  2657233 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40E3.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018232 F40E3.5 F40E3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40E3.5 F40E3.5 1035   I: 2645309-2645398

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40E3.5.2 2645266 2657233 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4874   133   I: 2645266-2645398 Caenorhabditis elegans
Exon4877   177   I: 2645483-2645659 Caenorhabditis elegans
Exon4879   686   I: 2646438-2647123 Caenorhabditis elegans
Exon4880   101   I: 2647957-2648057 Caenorhabditis elegans
Exon4895   62   I: 2657172-2657233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40E3.5.2 2645266 2657233 -1

1 Sequence

Length
1159

1 Sequence Ontology Term

Identifier Name Description
transcript