WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32B5.7a.1 Sequence Name  F32B5.7a.1
Length (nt)  2753   Chromosome Location  I: 2672940-2682797
Chromosome . Primary Identifier  I Chromosome Location . Start  2672940
Chromosome Location . End  2682797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32B5.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017980 F32B5.7 F32B5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32B5.7a F32B5.7a 2379   I: 2673245-2673390

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32B5.7a.1 2672940 2682797 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5007   451   I: 2672940-2673390 Caenorhabditis elegans
Exon5011   246   I: 2674219-2674464 Caenorhabditis elegans
Exon5014   244   I: 2674643-2674886 Caenorhabditis elegans
Exon5017   175   I: 2675236-2675410 Caenorhabditis elegans
Exon5020   809   I: 2675940-2676748 Caenorhabditis elegans
Exon5023   144   I: 2677912-2678055 Caenorhabditis elegans
Exon5027   151   I: 2679056-2679206 Caenorhabditis elegans
Exon5030   68   I: 2679261-2679328 Caenorhabditis elegans
Exon5033   90   I: 2679801-2679890 Caenorhabditis elegans
Exon5037   111   I: 2680555-2680665 Caenorhabditis elegans
Exon5039   264   I: 2682534-2682797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32B5.7a.1 2672940 2682797 -1

1 Sequence

Length
2753

1 Sequence Ontology Term

Identifier Name Description
transcript