WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32B5.7a.2 Sequence Name  F32B5.7a.2
Length (nt)  2506   Chromosome Location  I: 2673049-2682797
Chromosome . Primary Identifier  I Chromosome Location . Start  2673049
Chromosome Location . End  2682797 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32B5.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017980 F32B5.7 F32B5.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32B5.7a F32B5.7a 2379   I: 2673245-2673390

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32B5.7a.2 2673049 2682797 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5008   12   I: 2673049-2673060 Caenorhabditis elegans
Exon5009   192   I: 2673199-2673390 Caenorhabditis elegans
Exon5012   246   I: 2674219-2674464 Caenorhabditis elegans
Exon5015   244   I: 2674643-2674886 Caenorhabditis elegans
Exon5018   175   I: 2675236-2675410 Caenorhabditis elegans
Exon5021   809   I: 2675940-2676748 Caenorhabditis elegans
Exon5024   144   I: 2677912-2678055 Caenorhabditis elegans
Exon5028   151   I: 2679056-2679206 Caenorhabditis elegans
Exon5031   68   I: 2679261-2679328 Caenorhabditis elegans
Exon5034   90   I: 2679801-2679890 Caenorhabditis elegans
Exon5038   111   I: 2680555-2680665 Caenorhabditis elegans
Exon5040   264   I: 2682534-2682797 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32B5.7a.2 2673049 2682797 -1

1 Sequence

Length
2506

1 Sequence Ontology Term

Identifier Name Description
transcript