WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:Y71F9B.3.1 Sequence Name  Y71F9B.3.1
Length (nt)  766   Chromosome Location  I: 2730004-2731453
Chromosome . Primary Identifier  I Chromosome Location . Start  2730004
Chromosome Location . End  2731453 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9B.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022127 yop-1 Y71F9B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.3 Y71F9B.3 552   I: 2730010-2730236

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9B.3.1 2730004 2731453 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5157   233   I: 2730004-2730236 Caenorhabditis elegans
Exon5158   533   I: 2730921-2731453 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9B.3.1 2730004 2731453 1

1 Sequence

Length
766

1 Sequence Ontology Term

Identifier Name Description
transcript