WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03D8.1.1 Sequence Name  W03D8.1.1
Length (nt)  1133   Chromosome Location  I: 2788748-2790343
Chromosome . Primary Identifier  I Chromosome Location . Start  2788748
Chromosome Location . End  2790343 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03D8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020984 W03D8.1 W03D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03D8.1 W03D8.1 1077   I: 2788770-2789212

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03D8.1.1 2788748 2790343 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5317   465   I: 2788748-2789212 Caenorhabditis elegans
Exon5318   148   I: 2789492-2789639 Caenorhabditis elegans
Exon5319   65   I: 2789685-2789749 Caenorhabditis elegans
Exon5320   155   I: 2789796-2789950 Caenorhabditis elegans
Exon5321   132   I: 2789998-2790129 Caenorhabditis elegans
Exon5322   168   I: 2790176-2790343 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03D8.1.1 2788748 2790343 -1

1 Sequence

Length
1133

1 Sequence Ontology Term

Identifier Name Description
transcript