WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03D8.6b.1 Sequence Name  W03D8.6b.1
Length (nt)  5059   Chromosome Location  I: 2802803-2815820
Chromosome . Primary Identifier  I Chromosome Location . Start  2802803
Chromosome Location . End  2815820 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03D8.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002174 itx-1 W03D8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03D8.6b W03D8.6b 4863   I: 2802822-2802960

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03D8.6b.1 2802803 2815820 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5356   158   I: 2802803-2802960 Caenorhabditis elegans
Exon5360   107   I: 2803997-2804103 Caenorhabditis elegans
Exon5363   97   I: 2804151-2804247 Caenorhabditis elegans
Exon5366   293   I: 2804938-2805230 Caenorhabditis elegans
Exon5371   76   I: 2805324-2805399 Caenorhabditis elegans
Exon5376   268   I: 2805455-2805722 Caenorhabditis elegans
Exon5381   232   I: 2805800-2806031 Caenorhabditis elegans
Exon5386   178   I: 2806794-2806971 Caenorhabditis elegans
Exon5391   141   I: 2807018-2807158 Caenorhabditis elegans
Exon5396   124   I: 2807207-2807330 Caenorhabditis elegans
Exon5401   97   I: 2807619-2807715 Caenorhabditis elegans
Exon5406   199   I: 2808246-2808444 Caenorhabditis elegans
Exon5411   150   I: 2808660-2808809 Caenorhabditis elegans
Exon5416   44   I: 2808867-2808910 Caenorhabditis elegans
Exon5421   179   I: 2808963-2809141 Caenorhabditis elegans
Exon5426   144   I: 2809188-2809331 Caenorhabditis elegans
Exon5431   86   I: 2810159-2810244 Caenorhabditis elegans
Exon5436   299   I: 2810289-2810587 Caenorhabditis elegans
Exon5441   186   I: 2810974-2811159 Caenorhabditis elegans
Exon5445   154   I: 2811241-2811394 Caenorhabditis elegans
Exon5450   153   I: 2811470-2811622 Caenorhabditis elegans
Exon5455   343   I: 2811674-2812016 Caenorhabditis elegans
Exon5460   160   I: 2812121-2812280 Caenorhabditis elegans
Exon5465   154   I: 2812785-2812938 Caenorhabditis elegans
Exon5470   279   I: 2813000-2813278 Caenorhabditis elegans
Exon5475   96   I: 2813394-2813489 Caenorhabditis elegans
Exon5480   84   I: 2813547-2813630 Caenorhabditis elegans
Exon5485   62   I: 2813686-2813747 Caenorhabditis elegans
Exon5492   161   I: 2814200-2814360 Caenorhabditis elegans
Exon5497   355   I: 2815466-2815820 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03D8.6b.1 2802803 2815820 1

1 Sequence

Length
5059

1 Sequence Ontology Term

Identifier Name Description
transcript