WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10C8.1a.1 Sequence Name  W10C8.1a.1
Length (nt)  1302   Chromosome Location  I: 2845859-2849903
Chromosome . Primary Identifier  I Chromosome Location . Start  2845859
Chromosome Location . End  2849903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10C8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021125 ccb-2 W10C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10C8.1a W10C8.1a 1191   I: 2845859-2845970

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10C8.1a.1 2845859 2849903 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5526   112   I: 2845859-2845970 Caenorhabditis elegans
Exon5530   71   I: 2846715-2846785 Caenorhabditis elegans
Exon5534   96   I: 2846959-2847054 Caenorhabditis elegans
Exon5538   123   I: 2847110-2847232 Caenorhabditis elegans
Exon5542   543   I: 2848044-2848586 Caenorhabditis elegans
Exon5547   132   I: 2849255-2849386 Caenorhabditis elegans
Exon5553   225   I: 2849679-2849903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10C8.1a.1 2845859 2849903 1

1 Sequence

Length
1302

1 Sequence Ontology Term

Identifier Name Description
transcript