WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71F9AL.12d.1 Sequence Name  Y71F9AL.12d.1
Length (nt)  387   Chromosome Location  I: 2870608-2873162
Chromosome . Primary Identifier  I Chromosome Location . Start  2870608
Chromosome Location . End  2873162 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9AL.12d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022117 Y71F9AL.12 Y71F9AL.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AL.12d Y71F9AL.12d 387   I: 2870608-2870631

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AL.12d.1 2870608 2873162 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5607   24   I: 2870608-2870631 Caenorhabditis elegans
Exon5615   218   I: 2871498-2871715 Caenorhabditis elegans
Exon5625   97   I: 2872666-2872762 Caenorhabditis elegans
Exon5633   48   I: 2873115-2873162 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AL.12d.1 2870608 2873162 -1

1 Sequence

Length
387

1 Sequence Ontology Term

Identifier Name Description
transcript