WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71F9AL.13a.1 Sequence Name  Y71F9AL.13a.1
Length (nt)  690   Chromosome Location  I: 2875398-2876308
Chromosome . Primary Identifier  I Chromosome Location . Start  2875398
Chromosome Location . End  2876308 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9AL.13a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004412 rpl-10a Y71F9AL.13 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AL.13a Y71F9AL.13a 651   I: 2875431-2875601

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AL.13a.1 2875398 2876308 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5652   204   I: 2875398-2875601 Caenorhabditis elegans
Exon5655   322   I: 2875650-2875971 Caenorhabditis elegans
Exon5660   164   I: 2876145-2876308 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AL.13a.1 2875398 2876308 -1

1 Sequence

Length
690

1 Sequence Ontology Term

Identifier Name Description
transcript