WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00220195 Gene Name  Y71F9AL.24
Sequence Name  ? Y71F9AL.24 Organism  Caenorhabditis elegans
Automated Description  Enriched in neurons based on RNA-seq studies. Biotype  SO:0001267
Genetic Position  Length (nt)  ? 123
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00220195

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71F9AL.24 Y71F9AL.24 123   I: 2888585-2888707
 

Other

0 CDSs

3 RNAi Result

WormBase ID
WBRNAi00058163
WBRNAi00033449
WBRNAi00022837

6 Allele

Public Name
gk963902
gk964159
gk962616
WBVar01279957
gk815726
gk888016

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00220195 2888585 2888707 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Neuronally enriched transcripts according to a comparison of neuronal nuclei IP samples to total nuclei using isolation of nuclei from tagged specific cell types (INTACT) technology. DESEQ2, fold change > 2 and FDR < 0.01. WBPaper00062103:neuron_enriched

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00220195 2888585 2888707 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
123

1 Sequence Ontology Term