WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71F9AL.17 Sequence Name  Y71F9AL.17
Length (nt)  3699   Chromosome Location  I: 2895562-2895839
Chromosome . Primary Identifier  I Chromosome Location . Start  2895562
Chromosome Location . End  2895839
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9AL.17

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29136 COPA-1 137.7 1232 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00004792
WBRNAi00080537
WBRNAi00085389
WBRNAi00058154
WBRNAi00026929
WBRNAi00026930
WBRNAi00071652
WBRNAi00071107
WBRNAi00037770
WBRNAi00117157
WBRNAi00112013

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71F9AL.17 2895562 2895839 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022119 copa-1 Y71F9AL.17 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71F9AL.17 2895562 2895839 -1
CDS:Y71F9AL.17 2895902 2896760 -1
CDS:Y71F9AL.17 2896814 2897121 -1
CDS:Y71F9AL.17 2897650 2898851 -1
CDS:Y71F9AL.17 2899698 2900703 -1
CDS:Y71F9AL.17 2900756 2900801 -1

1 Sequence

Length
3699

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71F9AL.17.1 Y71F9AL.17.1 3991   I: 2895329-2900860