WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71F9AL.4.1 Sequence Name  Y71F9AL.4.1
Length (nt)  1722   Chromosome Location  I: 2903635-2907757
Chromosome . Primary Identifier  I Chromosome Location . Start  2903635
Chromosome Location . End  2907757 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9AL.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022110 pph-7 Y71F9AL.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AL.4 Y71F9AL.4 1674   I: 2903635-2903650

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AL.4.1 2903635 2907757 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5705   16   I: 2903635-2903650 Caenorhabditis elegans
Exon5706   107   I: 2903780-2903886 Caenorhabditis elegans
Exon5707   129   I: 2903939-2904067 Caenorhabditis elegans
Exon5708   195   I: 2904974-2905168 Caenorhabditis elegans
Exon5709   108   I: 2905221-2905328 Caenorhabditis elegans
Exon5710   293   I: 2905406-2905698 Caenorhabditis elegans
Exon5711   61   I: 2906018-2906078 Caenorhabditis elegans
Exon5712   179   I: 2906126-2906304 Caenorhabditis elegans
Exon5713   154   I: 2906368-2906521 Caenorhabditis elegans
Exon5714   480   I: 2907278-2907757 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AL.4.1 2903635 2907757 1

1 Sequence

Length
1722

1 Sequence Ontology Term

Identifier Name Description
transcript