WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71F9AL.18b.1 Sequence Name  Y71F9AL.18b.1
Length (nt)  267   Chromosome Location  I: 2907857-2908169
Chromosome . Primary Identifier  I Chromosome Location . Start  2907857
Chromosome Location . End  2908169 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9AL.18b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004049 parp-1 Y71F9AL.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AL.18b Y71F9AL.18b 267   I: 2907857-2907935

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AL.18b.1 2907857 2908169 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5717   79   I: 2907857-2907935 Caenorhabditis elegans
Exon5720   188   I: 2907982-2908169 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AL.18b.1 2907857 2908169 -1

1 Sequence

Length
267

1 Sequence Ontology Term

Identifier Name Description
transcript