WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y71F9AL.18d.1 Sequence Name  Y71F9AL.18d.1
Length (nt)  1047   Chromosome Location  I: 2907857-2914035
Chromosome . Primary Identifier  I Chromosome Location . Start  2907857
Chromosome Location . End  2914035 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9AL.18d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004049 parp-1 Y71F9AL.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9AL.18d Y71F9AL.18d 1047   I: 2907857-2907935

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AL.18d.1 2907857 2914035 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5719   79   I: 2907857-2907935 Caenorhabditis elegans
Exon5724   254   I: 2907982-2908235 Caenorhabditis elegans
Exon5729   216   I: 2910381-2910596 Caenorhabditis elegans
Exon5733   237   I: 2911987-2912223 Caenorhabditis elegans
Exon5734   261   I: 2913775-2914035 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y71F9AL.18d.1 2907857 2914035 -1

1 Sequence

Length
1047

1 Sequence Ontology Term

Identifier Name Description
transcript