WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00219263 Gene Name  mir-4931
Sequence Name  ? Y71F9AL.23 Organism  Caenorhabditis elegans
Automated Description  Is affected by glp-4 based on RNA-seq studies. Biotype  SO:0001265
Genetic Position  I :-5.29753± Length (nt)  ? 105
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00219263

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71F9AL.23b Y71F9AL.23b 20   I: 2921256-2921275
 

Other

0 CDSs

0 RNAi Result

7 Allele

Public Name
gk963902
gk964159
gk962616
WBVar01430833
gk851338
tm11107
WBVar02123565

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00219263 2921186 2921290 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  miRNAs that showed significantly decreased expression in glp-4(bn2) at 26 centigrade than in 15 centigrade. DESeq2 q-value < 0.05. WBPaper00049990:glp-4(bn2)_26C_vs_15C_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00219263 2921186 2921290 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
105

1 Sequence Ontology Term