WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71F9AM.5a Sequence Name  Y71F9AM.5a
Length (nt)  414   Chromosome Location  I: 2929840-2929884
Chromosome . Primary Identifier  I Chromosome Location . Start  2929840
Chromosome Location . End  2929884
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9AM.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26780 NXT-1, isoform a 15.5 137 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00058168
WBRNAi00000141
WBRNAi00026927
WBRNAi00094131
WBRNAi00027910
WBRNAi00094268
WBRNAi00066419
WBRNAi00026928
WBRNAi00081358
WBRNAi00087679
WBRNAi00110942
WBRNAi00071106

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71F9AM.5a 2929840 2929884 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003836 nxt-1 Y71F9AM.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71F9AM.5a 2929840 2929884 1
CDS:Y71F9AM.5a 2929946 2930088 1
CDS:Y71F9AM.5a 2930174 2930366 1
CDS:Y71F9AM.5a 2931223 2931255 1

1 Sequence

Length
414

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71F9AM.5a.1 Y71F9AM.5a.1 529   I: 2929830-2931360