WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10BL.3.1 Sequence Name  Y54E10BL.3.1
Length (nt)  658   Chromosome Location  I: 3004049-3005943
Chromosome . Primary Identifier  I Chromosome Location . Start  3004049
Chromosome Location . End  3005943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10BL.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021838 Y54E10BL.3 Y54E10BL.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10BL.3 Y54E10BL.3 180   I: 3004185-3004212

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10BL.3.1 3004049 3005943 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5855   164   I: 3004049-3004212 Caenorhabditis elegans
Exon5856   84   I: 3004263-3004346 Caenorhabditis elegans
Exon5858   410   I: 3005534-3005943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10BL.3.1 3004049 3005943 1

1 Sequence

Length
658

1 Sequence Ontology Term

Identifier Name Description
transcript