WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10BR.4b.1 Sequence Name  Y54E10BR.4b.1
Length (nt)  843   Chromosome Location  I: 3018075-3021422
Chromosome . Primary Identifier  I Chromosome Location . Start  3018075
Chromosome Location . End  3021422 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10BR.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021843 nobh-1 Y54E10BR.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10BR.4b Y54E10BR.4b 843   I: 3018075-3018599

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10BR.4b.1 3018075 3021422 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5870   525   I: 3018075-3018599 Caenorhabditis elegans
Exon5872   227   I: 3019563-3019789 Caenorhabditis elegans
Exon5873   91   I: 3021332-3021422 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10BR.4b.1 3018075 3021422 1

1 Sequence

Length
843

1 Sequence Ontology Term

Identifier Name Description
transcript