WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E10BR.5 Sequence Name  Y54E10BR.5
Length (nt)  552   Chromosome Location  I: 3028476-3028718
Chromosome . Primary Identifier  I Chromosome Location . Start  3028476
Chromosome Location . End  3028718
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10BR.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22466 SEC-11 20.6 183 Caenorhabditis elegans
 

Other

30 RNAi

WormBase ID
WBRNAi00095801
WBRNAi00113297
WBRNAi00066852
WBRNAi00099836
WBRNAi00100507
WBRNAi00037464
WBRNAi00100881
WBRNAi00099230
WBRNAi00099634
WBRNAi00099432
WBRNAi00113174
WBRNAi00113068
WBRNAi00089202
WBRNAi00096067
WBRNAi00096396
WBRNAi00096144
WBRNAi00096661
WBRNAi00096221
WBRNAi00096479
WBRNAi00101068
WBRNAi00110762
WBRNAi00113137
WBRNAi00096298
WBRNAi00100694
WBRNAi00095915
WBRNAi00094914
WBRNAi00096562
WBRNAi00100320
WBRNAi00100133
WBRNAi00095992

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E10BR.5 3028476 3028718 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021844 sec-11 Y54E10BR.5 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E10BR.5 3028476 3028718 -1
CDS:Y54E10BR.5 3030008 3030256 -1
CDS:Y54E10BR.5 3031033 3031092 -1

1 Sequence

Length
552

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E10BR.5.1 Y54E10BR.5.1 703   I: 3028325-3031092