WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E10BR.2 Sequence Name  Y54E10BR.2
Length (nt)  576   Chromosome Location  I: 3033006-3033098
Chromosome . Primary Identifier  I Chromosome Location . Start  3033006
Chromosome Location . End  3033098
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10BR.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22471 Y54E10BR.2 21.3 191 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00057360
WBRNAi00004739
WBRNAi00076818
WBRNAi00037466
WBRNAi00061938
WBRNAi00117112
WBRNAi00108597
WBRNAi00099104
WBRNAi00108672

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E10BR.2 3033006 3033098 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021841 Y54E10BR.2 Y54E10BR.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E10BR.2 3033006 3033098 1
CDS:Y54E10BR.2 3033155 3033242 1
CDS:Y54E10BR.2 3033296 3033460 1
CDS:Y54E10BR.2 3033530 3033621 1
CDS:Y54E10BR.2 3033687 3033824 1

1 Sequence

Length
576

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E10BR.2.1 Y54E10BR.2.1 1590   I: 3032935-3034767
Transcript:Y54E10BR.2.2 Y54E10BR.2.2 845   I: 3032967-3034761
Transcript:Y54E10BR.2.3 Y54E10BR.2.3 845   I: 3032967-3034761