WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M01B12.4c.2 Sequence Name  M01B12.4c.2
Length (nt)  3333   Chromosome Location  I: 3070982-3084876
Chromosome . Primary Identifier  I Chromosome Location . Start  3070982
Chromosome Location . End  3084876 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M01B12.4c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019697 M01B12.4 M01B12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M01B12.4c M01B12.4c 2037   I: 3072239-3072271

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M01B12.4c.2 3070982 3084876 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon5958   1290   I: 3070982-3072271 Caenorhabditis elegans
Exon5965   107   I: 3072866-3072972 Caenorhabditis elegans
Exon5967   132   I: 3075136-3075267 Caenorhabditis elegans
Exon5971   451   I: 3076564-3077014 Caenorhabditis elegans
Exon5975   614   I: 3078318-3078931 Caenorhabditis elegans
Exon5979   295   I: 3080460-3080754 Caenorhabditis elegans
Exon5984   283   I: 3082944-3083226 Caenorhabditis elegans
Exon5988   107   I: 3083957-3084063 Caenorhabditis elegans
Exon5992   54   I: 3084823-3084876 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M01B12.4c.2 3070982 3084876 -1

1 Sequence

Length
3333

1 Sequence Ontology Term

Identifier Name Description
transcript