WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09H9.6.1 Sequence Name  K09H9.6.1
Length (nt)  1841   Chromosome Location  I: 3144411-3147793
Chromosome . Primary Identifier  I Chromosome Location . Start  3144411
Chromosome Location . End  3147793 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09H9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003062 lpd-6 K09H9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09H9.6 K09H9.6 1722   I: 3144521-3144980

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09H9.6.1 3144411 3147793 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6082   570   I: 3144411-3144980 Caenorhabditis elegans
Exon6083   462   I: 3145034-3145495 Caenorhabditis elegans
Exon6084   126   I: 3146093-3146218 Caenorhabditis elegans
Exon6085   77   I: 3146270-3146346 Caenorhabditis elegans
Exon6086   182   I: 3147132-3147313 Caenorhabditis elegans
Exon6087   424   I: 3147370-3147793 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09H9.6.1 3144411 3147793 -1

1 Sequence

Length
1841

1 Sequence Ontology Term

Identifier Name Description
transcript