WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E10A.6 Sequence Name  Y54E10A.6
Length (nt)  1524   Chromosome Location  I: 3163692-3163820
Chromosome . Primary Identifier  I Chromosome Location . Start  3163692
Chromosome Location . End  3163820
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24450 Y54E10A.6 56.4 507 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00001852
WBRNAi00057351
WBRNAi00004731
WBRNAi00076815
WBRNAi00037457
WBRNAi00117111

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E10A.6 3163692 3163820 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021828 Y54E10A.6 Y54E10A.6 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E10A.6 3163692 3163820 1
CDS:Y54E10A.6 3163957 3164089 1
CDS:Y54E10A.6 3164591 3165417 1
CDS:Y54E10A.6 3166109 3166330 1
CDS:Y54E10A.6 3167221 3167433 1

1 Sequence

Length
1524

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E10A.6.1 Y54E10A.6.1 2152   I: 3163688-3168057