WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10A.10.1 Sequence Name  Y54E10A.10.1
Length (nt)  994   Chromosome Location  I: 3173268-3176319
Chromosome . Primary Identifier  I Chromosome Location . Start  3173268
Chromosome Location . End  3176319 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021830 Y54E10A.10 Y54E10A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.10 Y54E10A.10 894   I: 3173359-3173868

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10A.10.1 3173268 3176319 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6144   601   I: 3173268-3173868 Caenorhabditis elegans
Exon6145   199   I: 3175052-3175250 Caenorhabditis elegans
Exon6146   116   I: 3176054-3176169 Caenorhabditis elegans
Exon6147   78   I: 3176242-3176319 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10A.10.1 3173268 3176319 -1

1 Sequence

Length
994

1 Sequence Ontology Term

Identifier Name Description
transcript