WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E10A.11 Sequence Name  Y54E10A.11
Length (nt)  4341   Chromosome Location  I: 3176512-3176574
Chromosome . Primary Identifier  I Chromosome Location . Start  3176512
Chromosome Location . End  3176574
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.11

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37436 Y54E10A.11 165.4 1446 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00057339
WBRNAi00057346

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E10A.11 3176512 3176574 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021831 Y54E10A.11 Y54E10A.11 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E10A.11 3176512 3176574 -1
CDS:Y54E10A.11 3178203 3178816 -1
CDS:Y54E10A.11 3179674 3179935 -1
CDS:Y54E10A.11 3179992 3180061 -1
CDS:Y54E10A.11 3180885 3181327 -1
CDS:Y54E10A.11 3183062 3183194 -1
CDS:Y54E10A.11 3183244 3183330 -1
CDS:Y54E10A.11 3184316 3184595 -1
CDS:Y54E10A.11 3185597 3185744 -1
CDS:Y54E10A.11 3185792 3186769 -1
CDS:Y54E10A.11 3187892 3188469 -1
CDS:Y54E10A.11 3190209 3190770 -1
CDS:Y54E10A.11 3192525 3192611 -1
CDS:Y54E10A.11 3192661 3192696 -1

1 Sequence

Length
4341

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E10A.11.1 Y54E10A.11.1 4596   I: 3176418-3192857
Transcript:Y54E10A.11.2 Y54E10A.11.2 4479   I: 3176418-3192740