WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E10A.14a Sequence Name  Y54E10A.14a
Length (nt)  978   Chromosome Location  I: 3217420-3217561
Chromosome . Primary Identifier  I Chromosome Location . Start  3217420
Chromosome Location . End  3217561
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.14a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45659 ROM-5, isoform a 36.5 325 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00057342

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E10A.14a 3217420 3217561 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004404 rom-5 Y54E10A.14 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E10A.14a 3217420 3217561 -1
CDS:Y54E10A.14a 3218011 3218107 -1
CDS:Y54E10A.14a 3218787 3218992 -1
CDS:Y54E10A.14a 3220025 3220167 -1
CDS:Y54E10A.14a 3220731 3220805 -1
CDS:Y54E10A.14a 3220941 3221054 -1
CDS:Y54E10A.14a 3222750 3222950 -1

1 Sequence

Length
978

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E10A.14a.1 Y54E10A.14a.1 1107   I: 3217296-3222955