WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10A.3.1 Sequence Name  Y54E10A.3.1
Length (nt)  1073   Chromosome Location  I: 3229431-3233286
Chromosome . Primary Identifier  I Chromosome Location . Start  3229431
Chromosome Location . End  3233286 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021826 txl-1 Y54E10A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.3 Y54E10A.3 855   I: 3229448-3229698

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10A.3.1 3229431 3233286 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6254   268   I: 3229431-3229698 Caenorhabditis elegans
Exon6255   499   I: 3231611-3232109 Caenorhabditis elegans
Exon6257   306   I: 3232981-3233286 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10A.3.1 3229431 3233286 1

1 Sequence

Length
1073

1 Sequence Ontology Term

Identifier Name Description
transcript