WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E10A.16.1 Sequence Name  Y54E10A.16.1
Length (nt)  1718   Chromosome Location  I: 3244151-3246073
Chromosome . Primary Identifier  I Chromosome Location . Start  3244151
Chromosome Location . End  3246073 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.16.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021834 mab-31 Y54E10A.16 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.16 Y54E10A.16 1284   I: 3244573-3244902

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10A.16.1 3244151 3246073 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6267   752   I: 3244151-3244902 Caenorhabditis elegans
Exon6268   432   I: 3244950-3245381 Caenorhabditis elegans
Exon6269   112   I: 3245440-3245551 Caenorhabditis elegans
Exon6270   126   I: 3245603-3245728 Caenorhabditis elegans
Exon6271   296   I: 3245778-3246073 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54E10A.16.1 3244151 3246073 -1

1 Sequence

Length
1718

1 Sequence Ontology Term

Identifier Name Description
transcript