WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E10A.16 Sequence Name  Y54E10A.16
Length (nt)  1284   Chromosome Location  I: 3244573-3244902
Chromosome . Primary Identifier  I Chromosome Location . Start  3244573
Chromosome Location . End  3244902
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.16

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24445 MAB-31 49.5 427 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00000394
WBRNAi00057344
WBRNAi00026824
WBRNAi00026826
WBRNAi00004725
WBRNAi00026825
WBRNAi00064299
WBRNAi00064307
WBRNAi00083047
WBRNAi00083048
WBRNAi00088782
WBRNAi00088675

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E10A.16 3244573 3244902 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021834 mab-31 Y54E10A.16 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E10A.16 3244573 3244902 -1
CDS:Y54E10A.16 3244950 3245381 -1
CDS:Y54E10A.16 3245440 3245551 -1
CDS:Y54E10A.16 3245603 3245728 -1
CDS:Y54E10A.16 3245778 3246061 -1

1 Sequence

Length
1284

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E10A.16.1 Y54E10A.16.1 1718   I: 3244151-3246073