WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01B11.2a.1 Sequence Name  W01B11.2a.1
Length (nt)  2659   Chromosome Location  I: 3287336-3293171
Chromosome . Primary Identifier  I Chromosome Location . Start  3287336
Chromosome Location . End  3293171 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01B11.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020914 sulp-6 W01B11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01B11.2a W01B11.2a 2571   I: 3287380-3287522

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01B11.2a.1 3287336 3293171 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6385   187   I: 3287336-3287522 Caenorhabditis elegans
Exon6387   70   I: 3287684-3287753 Caenorhabditis elegans
Exon6389   226   I: 3288308-3288533 Caenorhabditis elegans
Exon6391   467   I: 3288585-3289051 Caenorhabditis elegans
Exon6393   681   I: 3289832-3290512 Caenorhabditis elegans
Exon6394   107   I: 3291268-3291374 Caenorhabditis elegans
Exon6396   185   I: 3291494-3291678 Caenorhabditis elegans
Exon6398   99   I: 3291727-3291825 Caenorhabditis elegans
Exon6400   105   I: 3291906-3292010 Caenorhabditis elegans
Exon6402   108   I: 3292402-3292509 Caenorhabditis elegans
Exon6405   131   I: 3292635-3292765 Caenorhabditis elegans
Exon6407   106   I: 3292809-3292914 Caenorhabditis elegans
Exon6412   187   I: 3292985-3293171 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01B11.2a.1 3287336 3293171 1

1 Sequence

Length
2659

1 Sequence Ontology Term

Identifier Name Description
transcript